debspawn 0.6.5 on fennel at 2024-10-16 15:16:54 UTC-0700 gpgv: Signature made Thu 05 Sep 2024 01:16:54 AM PDT gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for /var/lib/lkspark/workspaces/185113c1-4895-4ebb-8e8a-f0b9590debe2/r-bioc-ensembldb_2.28.1+dfsg-1.dsc: no acceptable signature found dpkg-source: info: extracting r-bioc-ensembldb in r-bioc-ensembldb-2.28.1+dfsg dpkg-source: info: unpacking r-bioc-ensembldb_2.28.1+dfsg.orig.tar.xz dpkg-source: info: unpacking r-bioc-ensembldb_2.28.1+dfsg-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying add_shebang_line_to_perl_script.patch dpkg-source: info: applying Fix_autopkgtest.patch ╔═══════════════════════╗ ║ Package build ║ ╚═══════════════════════╝ Package: r-bioc-ensembldb Version: 2.28.1+dfsg-1 Distribution: landing Architecture: amd64 Free space in workspace: 65.6GiB ┌───────────────────────────────────────┐ │ Preparing container for build │ └───────────────────────────────────────┘ Get:1 https://repo.pureos.net/pureos landing InRelease [9625 B] Get:2 https://repo.pureos.net/pureos landing/main all Packages [3880 kB] Get:3 https://repo.pureos.net/pureos landing/main amd64 Packages [4390 kB] Fetched 8279 kB in 2s (4416 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: gpgv 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 0 B/218 kB of archives. After this operation, 1024 B disk space will be freed. debconf: delaying package configuration, since apt-utils is not installed (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13780 files and directories currently installed.) Preparing to unpack .../gpgv_2.2.44-1_amd64.deb ... Unpacking gpgv (2.2.44-1) over (2.2.43-8+b1) ... Setting up gpgv (2.2.44-1) ... Reading package lists... Building dependency tree... Reading state information... build-essential is already the newest version (12.10). dpkg-dev is already the newest version (1.21.22pureos1). fakeroot is already the newest version (1.36-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. ┌───────────────────────────────────────────────┐ │ Installing package build-dependencies │ └───────────────────────────────────────────────┘ Note, using directory './' to get the build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils dctrl-tools debhelper dh-autoreconf dh-r dh-strip-nondeterminism dwz file fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-font-awesome fonts-glyphicons-halflings fonts-lmodern fonts-mathjax gettext gettext-base gfortran gfortran-14 gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu groff-base icu-devtools intltool-debian javascript-common libalgorithm-c3-perl libarchive-zip-perl libb-hooks-endofscope-perl libb-hooks-op-check-perl libbibtex-parser-perl libblas-dev libblas3 libboost-dev libboost1.83-dev libbrotli1 libbz2-dev libcairo2 libclass-c3-perl libclass-load-perl libclass-load-xs-perl libclone-perl libcurl3t64-gnutls libcurl4t64 libdata-optlist-perl libdatrie1 libdebhelper-perl libdeflate-dev libdeflate0 libdevel-callchecker-perl libdevel-globaldestruction-perl libdevel-overloadinfo-perl libdevel-stacktrace-perl libdist-checkconflicts-perl libdynaloader-functions-perl libelf1t64 libencode-locale-perl libeval-closure-perl libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1 libfreetype6 libfribidi0 libgfortran-14-dev libgfortran5 libglib2.0-0t64 libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libhttp-date-perl libhttp-message-perl libice6 libicu-dev libicu72 libio-html-perl libio-string-perl libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libjs-bootstrap libjs-bootstrap4 libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js libjs-prettify libjs-sifter.js libjs-twitter-bootstrap-datepicker libk5crypto3 libkeyutils1 libkpathsea6 libkrb5-3 libkrb5support0 liblapack-dev liblapack3 liblatex-tounicode-perl libldap-2.5-0 liblerc4 liblua5.4-0 liblwp-mediatypes-perl liblzma-dev libmagic-mgc libmagic1t64 libmodule-implementation-perl libmodule-runtime-conflicts-perl libmodule-runtime-perl libmoose-perl libmpfi0 libmro-compat-perl libnamespace-clean-perl libncurses-dev libncurses6 libncursesw6 libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libpackage-deprecationmanager-perl libpackage-stash-perl libpackage-stash-xs-perl libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libparams-classify-perl libparams-util-perl libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpipeline1 libpixman-1-0 libpkgconf3 libpng-dev libpng16-16t64 libpotrace0 libpsl5t64 libptexenc1 libreadline-dev libreadline8t64 librtmp1 libsasl2-2 libsasl2-modules-db libsharpyuv0 libsm6 libssh2-1t64 libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libswitch-perl libsynctex2 libtcl8.6 libteckit0 libtexlua53-5 libthai-data libthai0 libtiff6 libtimedate-perl libtirpc-common libtirpc-dev libtirpc3t64 libtk8.6 libtool libtry-tiny-perl libuchardet0 liburi-perl libuv1t64 libvariable-magic-perl libwebp7 libwww-curl-perl libwww-curl-simple-perl libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxi6 libxml2 libxmu6 libxmuu1 libxpm4 libxrender1 libxss1 libxt6t64 libyaml-0-2 libzzip-0-13t64 littler m4 man-db node-bootstrap-sass node-html5shiv node-normalize.css pandoc pandoc-data pkgconf pkgconf-bin po-debconf r-base-core r-base-dev r-bioc-annotationdbi r-bioc-annotationfilter r-bioc-biobase r-bioc-biocgenerics r-bioc-biocio r-bioc-biocparallel r-bioc-biocstyle r-bioc-biocversion r-bioc-biostrings r-bioc-delayedarray r-bioc-genomeinfodb r-bioc-genomeinfodbdata r-bioc-genomicalignments r-bioc-genomicfeatures r-bioc-genomicranges r-bioc-iranges r-bioc-keggrest r-bioc-matrixgenerics r-bioc-protgenerics r-bioc-rhtslib r-bioc-rsamtools r-bioc-rtracklayer r-bioc-s4arrays r-bioc-s4vectors r-bioc-sparsearray r-bioc-summarizedexperiment r-bioc-ucsc.utils r-bioc-xvector r-bioc-zlibbioc r-cran-abind r-cran-askpass r-cran-base64enc r-cran-bh r-cran-biocmanager r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blob r-cran-bookdown r-cran-bslib r-cran-cachem r-cran-cli r-cran-codetools r-cran-commonmark r-cran-cpp11 r-cran-crayon r-cran-curl r-cran-dbi r-cran-digest r-cran-evaluate r-cran-fastmap r-cran-fontawesome r-cran-formatr r-cran-fs r-cran-futile.logger r-cran-futile.options r-cran-glue r-cran-highr r-cran-htmltools r-cran-httpuv r-cran-httr r-cran-jquerylib r-cran-jsonlite r-cran-knitr r-cran-lambda.r r-cran-later r-cran-lattice r-cran-lazyeval r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-matrix r-cran-matrixstats r-cran-memoise r-cran-mime r-cran-openssl r-cran-pkgconfig r-cran-pkgkitten r-cran-plogr r-cran-png r-cran-promises r-cran-r6 r-cran-rappdirs r-cran-rcpp r-cran-rcurl r-cran-restfulr r-cran-rjson r-cran-rlang r-cran-rmarkdown r-cran-rsqlite r-cran-sass r-cran-shiny r-cran-snow r-cran-sourcetools r-cran-sys r-cran-tinytex r-cran-vctrs r-cran-withr r-cran-xfun r-cran-xml r-cran-xtable r-cran-yaml readline-common sensible-utils t1utils tex-common texlive-base texlive-bibtex-extra texlive-binaries texlive-latex-base ucf unzip x11-common xauth xdg-utils zip zlib1g-dev 0 upgraded, 338 newly installed, 0 to remove and 0 not upgraded. Need to get 0 B/372 MB of archives. After this operation, 1196 MB of additional disk space will be used. debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package readline-common. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13779 files and directories currently installed.) Preparing to unpack .../000-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../002-libmagic-mgc_1%3a5.45-3_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../003-libmagic1t64_1%3a5.45-3_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../004-file_1%3a5.45-3_amd64.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../005-gettext-base_0.22.5-2_amd64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../006-libuchardet0_0.0.8-1+b1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../007-groff-base_1.23.0-5_amd64.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../008-bsdextrautils_2.40.2-9_amd64.deb ... Unpacking bsdextrautils (2.40.2-9) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../009-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../010-man-db_2.13.0-1_amd64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package ucf. Preparing to unpack .../011-ucf_3.0043+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0043+nmu1) ... Selecting previously unselected package m4. Preparing to unpack .../012-m4_1.4.19-4_amd64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../013-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../014-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../015-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../016-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package dctrl-tools. Preparing to unpack .../017-dctrl-tools_2.24-3+b1_amd64.deb ... Unpacking dctrl-tools (2.24-3+b1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../018-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../019-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../020-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../021-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../022-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../023-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../024-libelf1t64_0.191-2_amd64.deb ... Unpacking libelf1t64:amd64 (0.191-2) ... Selecting previously unselected package dwz. Preparing to unpack .../025-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../026-libicu72_72.1-5_amd64.deb ... Unpacking libicu72:amd64 (72.1-5) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../027-libxml2_2.12.7+dfsg+really2.9.14-0.1_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.1) ... Selecting previously unselected package gettext. Preparing to unpack .../028-gettext_0.22.5-2_amd64.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../029-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../030-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../031-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Selecting previously unselected package zip. Preparing to unpack .../032-zip_3.0-14_amd64.deb ... Unpacking zip (3.0-14) ... Selecting previously unselected package unzip. Preparing to unpack .../033-unzip_6.0-28_amd64.deb ... Unpacking unzip (6.0-28) ... Selecting previously unselected package libpaper1:amd64. Preparing to unpack .../034-libpaper1_1.1.29+b1_amd64.deb ... Unpacking libpaper1:amd64 (1.1.29+b1) ... Selecting previously unselected package libpaper-utils. Preparing to unpack .../035-libpaper-utils_1.1.29+b1_amd64.deb ... Unpacking libpaper-utils (1.1.29+b1) ... Selecting previously unselected package xdg-utils. Preparing to unpack .../036-xdg-utils_1.1.3-4.1_all.deb ... Unpacking xdg-utils (1.1.3-4.1) ... Selecting previously unselected package libblas3:amd64. Preparing to unpack .../037-libblas3_3.12.0-3_amd64.deb ... Unpacking libblas3:amd64 (3.12.0-3) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../038-libbrotli1_1.1.0-2+b4_amd64.deb ... Unpacking libbrotli1:amd64 (1.1.0-2+b4) ... Selecting previously unselected package libpng16-16t64:amd64. Preparing to unpack .../039-libpng16-16t64_1.6.44-2_amd64.deb ... Unpacking libpng16-16t64:amd64 (1.6.44-2) ... Selecting previously unselected package libfreetype6:amd64. Preparing to unpack .../040-libfreetype6_2.13.3+dfsg-1_amd64.deb ... Unpacking libfreetype6:amd64 (2.13.3+dfsg-1) ... Selecting previously unselected package fonts-dejavu-mono. Preparing to unpack .../041-fonts-dejavu-mono_2.37-8_all.deb ... Unpacking fonts-dejavu-mono (2.37-8) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../042-fonts-dejavu-core_2.37-8_all.deb ... Unpacking fonts-dejavu-core (2.37-8) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../043-fontconfig-config_2.15.0-1.1_amd64.deb ... Unpacking fontconfig-config (2.15.0-1.1) ... Selecting previously unselected package libfontconfig1:amd64. Preparing to unpack .../044-libfontconfig1_2.15.0-1.1_amd64.deb ... Unpacking libfontconfig1:amd64 (2.15.0-1.1) ... Selecting previously unselected package libpixman-1-0:amd64. Preparing to unpack .../045-libpixman-1-0_0.42.2-1+b1_amd64.deb ... Unpacking libpixman-1-0:amd64 (0.42.2-1+b1) ... Selecting previously unselected package libxau6:amd64. Preparing to unpack .../046-libxau6_1%3a1.0.9-1+b1_amd64.deb ... Unpacking libxau6:amd64 (1:1.0.9-1+b1) ... Selecting previously unselected package libxdmcp6:amd64. Preparing to unpack .../047-libxdmcp6_1%3a1.1.2-3+b1_amd64.deb ... Unpacking libxdmcp6:amd64 (1:1.1.2-3+b1) ... Selecting previously unselected package libxcb1:amd64. Preparing to unpack .../048-libxcb1_1.17.0-2_amd64.deb ... Unpacking libxcb1:amd64 (1.17.0-2) ... Selecting previously unselected package libx11-data. Preparing to unpack .../049-libx11-data_2%3a1.8.7-1_all.deb ... Unpacking libx11-data (2:1.8.7-1) ... Selecting previously unselected package libx11-6:amd64. Preparing to unpack .../050-libx11-6_2%3a1.8.7-1+b1_amd64.deb ... Unpacking libx11-6:amd64 (2:1.8.7-1+b1) ... Selecting previously unselected package libxcb-render0:amd64. Preparing to unpack .../051-libxcb-render0_1.17.0-2_amd64.deb ... Unpacking libxcb-render0:amd64 (1.17.0-2) ... Selecting previously unselected package libxcb-shm0:amd64. Preparing to unpack .../052-libxcb-shm0_1.17.0-2_amd64.deb ... Unpacking libxcb-shm0:amd64 (1.17.0-2) ... Selecting previously unselected package libxext6:amd64. Preparing to unpack .../053-libxext6_2%3a1.3.4-1+b2_amd64.deb ... Unpacking libxext6:amd64 (2:1.3.4-1+b2) ... Selecting previously unselected package libxrender1:amd64. Preparing to unpack .../054-libxrender1_1%3a0.9.10-1.1+b1_amd64.deb ... Unpacking libxrender1:amd64 (1:0.9.10-1.1+b1) ... Selecting previously unselected package libcairo2:amd64. Preparing to unpack .../055-libcairo2_1.18.2-2_amd64.deb ... Unpacking libcairo2:amd64 (1.18.2-2) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../056-libkrb5support0_1.21.3-3_amd64.deb ... Unpacking libkrb5support0:amd64 (1.21.3-3) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../057-libk5crypto3_1.21.3-3_amd64.deb ... Unpacking libk5crypto3:amd64 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../058-libkeyutils1_1.6.3-3_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-3) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../059-libkrb5-3_1.21.3-3_amd64.deb ... Unpacking libkrb5-3:amd64 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../060-libgssapi-krb5-2_1.21.3-3_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.21.3-3) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../061-libsasl2-modules-db_2.1.28+dfsg1-8_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.28+dfsg1-8) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../062-libsasl2-2_2.1.28+dfsg1-8_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.28+dfsg1-8) ... Selecting previously unselected package libldap-2.5-0:amd64. Preparing to unpack .../063-libldap-2.5-0_2.5.18+dfsg-3_amd64.deb ... Unpacking libldap-2.5-0:amd64 (2.5.18+dfsg-3) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../064-libnghttp2-14_1.63.0-1_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.63.0-1) ... Selecting previously unselected package libpsl5t64:amd64. Preparing to unpack .../065-libpsl5t64_0.21.2-1.1_amd64.deb ... Unpacking libpsl5t64:amd64 (0.21.2-1.1) ... Selecting previously unselected package librtmp1:amd64. Preparing to unpack .../066-librtmp1_2.4+20151223.gitfa8646d.1-2+b4_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b4) ... Selecting previously unselected package libssh2-1t64:amd64. Preparing to unpack .../067-libssh2-1t64_1.11.0-7_amd64.deb ... Unpacking libssh2-1t64:amd64 (1.11.0-7) ... Selecting previously unselected package libcurl4t64:amd64. Preparing to unpack .../068-libcurl4t64_8.10.1-2_amd64.deb ... Unpacking libcurl4t64:amd64 (8.10.1-2) ... Selecting previously unselected package libdeflate0:amd64. Preparing to unpack .../069-libdeflate0_1.22-1_amd64.deb ... Unpacking libdeflate0:amd64 (1.22-1) ... Selecting previously unselected package libglib2.0-0t64:amd64. Preparing to unpack .../070-libglib2.0-0t64_2.82.1-1_amd64.deb ... Unpacking libglib2.0-0t64:amd64 (2.82.1-1) ... Selecting previously unselected package libjpeg62-turbo:amd64. Preparing to unpack .../071-libjpeg62-turbo_1%3a2.1.5-3_amd64.deb ... Unpacking libjpeg62-turbo:amd64 (1:2.1.5-3) ... Selecting previously unselected package libgfortran5:amd64. Preparing to unpack .../072-libgfortran5_14.2.0-6_amd64.deb ... Unpacking libgfortran5:amd64 (14.2.0-6) ... Selecting previously unselected package liblapack3:amd64. Preparing to unpack .../073-liblapack3_3.12.0-3_amd64.deb ... Unpacking liblapack3:amd64 (3.12.0-3) ... Selecting previously unselected package fontconfig. Preparing to unpack .../074-fontconfig_2.15.0-1.1_amd64.deb ... Unpacking fontconfig (2.15.0-1.1) ... Selecting previously unselected package libfribidi0:amd64. Preparing to unpack .../075-libfribidi0_1.0.15-1_amd64.deb ... Unpacking libfribidi0:amd64 (1.0.15-1) ... Selecting previously unselected package libgraphite2-3:amd64. Preparing to unpack .../076-libgraphite2-3_1.3.14-2_amd64.deb ... Unpacking libgraphite2-3:amd64 (1.3.14-2) ... Selecting previously unselected package libharfbuzz0b:amd64. Preparing to unpack .../077-libharfbuzz0b_9.0.0-1_amd64.deb ... Unpacking libharfbuzz0b:amd64 (9.0.0-1) ... Selecting previously unselected package libthai-data. Preparing to unpack .../078-libthai-data_0.1.29-2_all.deb ... Unpacking libthai-data (0.1.29-2) ... Selecting previously unselected package libdatrie1:amd64. Preparing to unpack .../079-libdatrie1_0.2.13-3_amd64.deb ... Unpacking libdatrie1:amd64 (0.2.13-3) ... Selecting previously unselected package libthai0:amd64. Preparing to unpack .../080-libthai0_0.1.29-2_amd64.deb ... Unpacking libthai0:amd64 (0.1.29-2) ... Selecting previously unselected package libpango-1.0-0:amd64. Preparing to unpack .../081-libpango-1.0-0_1.54.0+ds-2_amd64.deb ... Unpacking libpango-1.0-0:amd64 (1.54.0+ds-2) ... Selecting previously unselected package libpangoft2-1.0-0:amd64. Preparing to unpack .../082-libpangoft2-1.0-0_1.54.0+ds-2_amd64.deb ... Unpacking libpangoft2-1.0-0:amd64 (1.54.0+ds-2) ... Selecting previously unselected package libpangocairo-1.0-0:amd64. Preparing to unpack .../083-libpangocairo-1.0-0_1.54.0+ds-2_amd64.deb ... Unpacking libpangocairo-1.0-0:amd64 (1.54.0+ds-2) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../084-libreadline8t64_8.2-5_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-5) ... Selecting previously unselected package libtcl8.6:amd64. Preparing to unpack .../085-libtcl8.6_8.6.15+dfsg-2_amd64.deb ... Unpacking libtcl8.6:amd64 (8.6.15+dfsg-2) ... Selecting previously unselected package libjbig0:amd64. Preparing to unpack .../086-libjbig0_2.1-6.1+b1_amd64.deb ... Unpacking libjbig0:amd64 (2.1-6.1+b1) ... Selecting previously unselected package liblerc4:amd64. Preparing to unpack .../087-liblerc4_4.0.0+ds-4+b1_amd64.deb ... Unpacking liblerc4:amd64 (4.0.0+ds-4+b1) ... Selecting previously unselected package libsharpyuv0:amd64. Preparing to unpack .../088-libsharpyuv0_1.4.0-0.1_amd64.deb ... Unpacking libsharpyuv0:amd64 (1.4.0-0.1) ... Selecting previously unselected package libwebp7:amd64. Preparing to unpack .../089-libwebp7_1.4.0-0.1_amd64.deb ... Unpacking libwebp7:amd64 (1.4.0-0.1) ... Selecting previously unselected package libtiff6:amd64. Preparing to unpack .../090-libtiff6_4.5.1+git230720-5_amd64.deb ... Unpacking libtiff6:amd64 (4.5.1+git230720-5) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../091-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:amd64. Preparing to unpack .../092-libtirpc3t64_1.3.4+ds-1.3_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:amd64 (1.3.4+ds-1.3) ... Selecting previously unselected package libxft2:amd64. Preparing to unpack .../093-libxft2_2.3.6-1+b1_amd64.deb ... Unpacking libxft2:amd64 (2.3.6-1+b1) ... Selecting previously unselected package x11-common. Preparing to unpack .../094-x11-common_1%3a7.7+23.1_all.deb ... Unpacking x11-common (1:7.7+23.1) ... Selecting previously unselected package libxss1:amd64. Preparing to unpack .../095-libxss1_1%3a1.2.3-1+b1_amd64.deb ... Unpacking libxss1:amd64 (1:1.2.3-1+b1) ... Selecting previously unselected package libtk8.6:amd64. Preparing to unpack .../096-libtk8.6_8.6.15-1_amd64.deb ... Unpacking libtk8.6:amd64 (8.6.15-1) ... Selecting previously unselected package libice6:amd64. Preparing to unpack .../097-libice6_2%3a1.0.10-1+b1_amd64.deb ... Unpacking libice6:amd64 (2:1.0.10-1+b1) ... Selecting previously unselected package libsm6:amd64. Preparing to unpack .../098-libsm6_2%3a1.2.3-1+b1_amd64.deb ... Unpacking libsm6:amd64 (2:1.2.3-1+b1) ... Selecting previously unselected package libxt6t64:amd64. Preparing to unpack .../099-libxt6t64_1%3a1.2.1-1.2_amd64.deb ... Unpacking libxt6t64:amd64 (1:1.2.1-1.2) ... Selecting previously unselected package r-base-core. Preparing to unpack .../100-r-base-core_4.4.1-3_amd64.deb ... Unpacking r-base-core (4.4.1-3) ... Selecting previously unselected package libgfortran-14-dev:amd64. Preparing to unpack .../101-libgfortran-14-dev_14.2.0-6_amd64.deb ... Unpacking libgfortran-14-dev:amd64 (14.2.0-6) ... Selecting previously unselected package gfortran-14-x86-64-linux-gnu. Preparing to unpack .../102-gfortran-14-x86-64-linux-gnu_14.2.0-6_amd64.deb ... Unpacking gfortran-14-x86-64-linux-gnu (14.2.0-6) ... Selecting previously unselected package gfortran-14. Preparing to unpack .../103-gfortran-14_14.2.0-6_amd64.deb ... Unpacking gfortran-14 (14.2.0-6) ... Selecting previously unselected package gfortran-x86-64-linux-gnu. Preparing to unpack .../104-gfortran-x86-64-linux-gnu_4%3a14.2.0-1_amd64.deb ... Unpacking gfortran-x86-64-linux-gnu (4:14.2.0-1) ... Selecting previously unselected package gfortran. Preparing to unpack .../105-gfortran_4%3a14.2.0-1_amd64.deb ... Unpacking gfortran (4:14.2.0-1) ... Selecting previously unselected package libblas-dev:amd64. Preparing to unpack .../106-libblas-dev_3.12.0-3_amd64.deb ... Unpacking libblas-dev:amd64 (3.12.0-3) ... Selecting previously unselected package liblapack-dev:amd64. Preparing to unpack .../107-liblapack-dev_3.12.0-3_amd64.deb ... Unpacking liblapack-dev:amd64 (3.12.0-3) ... Selecting previously unselected package libncurses6:amd64. Preparing to unpack .../108-libncurses6_6.5-2_amd64.deb ... Unpacking libncurses6:amd64 (6.5-2) ... Selecting previously unselected package libncursesw6:amd64. Preparing to unpack .../109-libncursesw6_6.5-2_amd64.deb ... Unpacking libncursesw6:amd64 (6.5-2) ... Selecting previously unselected package libncurses-dev:amd64. Preparing to unpack .../110-libncurses-dev_6.5-2_amd64.deb ... Unpacking libncurses-dev:amd64 (6.5-2) ... Selecting previously unselected package libreadline-dev:amd64. Preparing to unpack .../111-libreadline-dev_8.2-5_amd64.deb ... Unpacking libreadline-dev:amd64 (8.2-5) ... Selecting previously unselected package libjpeg62-turbo-dev:amd64. Preparing to unpack .../112-libjpeg62-turbo-dev_1%3a2.1.5-3_amd64.deb ... Unpacking libjpeg62-turbo-dev:amd64 (1:2.1.5-3) ... Selecting previously unselected package libjpeg-dev:amd64. Preparing to unpack .../113-libjpeg-dev_1%3a2.1.5-3_amd64.deb ... Unpacking libjpeg-dev:amd64 (1:2.1.5-3) ... Selecting previously unselected package libpcre2-16-0:amd64. Preparing to unpack .../114-libpcre2-16-0_10.42-4+b1_amd64.deb ... Unpacking libpcre2-16-0:amd64 (10.42-4+b1) ... Selecting previously unselected package libpcre2-32-0:amd64. Preparing to unpack .../115-libpcre2-32-0_10.42-4+b1_amd64.deb ... Unpacking libpcre2-32-0:amd64 (10.42-4+b1) ... Selecting previously unselected package libpcre2-posix3:amd64. Preparing to unpack .../116-libpcre2-posix3_10.42-4+b1_amd64.deb ... Unpacking libpcre2-posix3:amd64 (10.42-4+b1) ... Selecting previously unselected package libpcre2-dev:amd64. Preparing to unpack .../117-libpcre2-dev_10.42-4+b1_amd64.deb ... Unpacking libpcre2-dev:amd64 (10.42-4+b1) ... Selecting previously unselected package zlib1g-dev:amd64. Preparing to unpack .../118-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1) ... Selecting previously unselected package libpng-dev:amd64. Preparing to unpack .../119-libpng-dev_1.6.44-2_amd64.deb ... Unpacking libpng-dev:amd64 (1.6.44-2) ... Selecting previously unselected package libbz2-dev:amd64. Preparing to unpack .../120-libbz2-dev_1.0.8-6_amd64.deb ... Unpacking libbz2-dev:amd64 (1.0.8-6) ... Selecting previously unselected package liblzma-dev:amd64. Preparing to unpack .../121-liblzma-dev_5.6.2-2_amd64.deb ... Unpacking liblzma-dev:amd64 (5.6.2-2) ... Selecting previously unselected package icu-devtools. Preparing to unpack .../122-icu-devtools_72.1-5_amd64.deb ... Unpacking icu-devtools (72.1-5) ... Selecting previously unselected package libicu-dev:amd64. Preparing to unpack .../123-libicu-dev_72.1-5_amd64.deb ... Unpacking libicu-dev:amd64 (72.1-5) ... Selecting previously unselected package libxmuu1:amd64. Preparing to unpack .../124-libxmuu1_2%3a1.1.3-3+b2_amd64.deb ... Unpacking libxmuu1:amd64 (2:1.1.3-3+b2) ... Selecting previously unselected package xauth. Preparing to unpack .../125-xauth_1%3a1.1.2-1_amd64.deb ... Unpacking xauth (1:1.1.2-1) ... Selecting previously unselected package libpkgconf3:amd64. Preparing to unpack .../126-libpkgconf3_1.8.1-3_amd64.deb ... Unpacking libpkgconf3:amd64 (1.8.1-3) ... Selecting previously unselected package pkgconf-bin. Preparing to unpack .../127-pkgconf-bin_1.8.1-3_amd64.deb ... Unpacking pkgconf-bin (1.8.1-3) ... Selecting previously unselected package pkgconf:amd64. Preparing to unpack .../128-pkgconf_1.8.1-3_amd64.deb ... Unpacking pkgconf:amd64 (1.8.1-3) ... Selecting previously unselected package libtirpc-dev:amd64. Preparing to unpack .../129-libtirpc-dev_1.3.4+ds-1.3_amd64.deb ... Unpacking libtirpc-dev:amd64 (1.3.4+ds-1.3) ... Selecting previously unselected package libdeflate-dev:amd64. Preparing to unpack .../130-libdeflate-dev_1.22-1_amd64.deb ... Unpacking libdeflate-dev:amd64 (1.22-1) ... Selecting previously unselected package r-base-dev. Preparing to unpack .../131-r-base-dev_4.4.1-3_all.deb ... Unpacking r-base-dev (4.4.1-3) ... Selecting previously unselected package libfile-which-perl. Preparing to unpack .../132-libfile-which-perl_1.27-2_all.deb ... Unpacking libfile-which-perl (1.27-2) ... Selecting previously unselected package libswitch-perl. Preparing to unpack .../133-libswitch-perl_2.17-3_all.deb ... Unpacking libswitch-perl (2.17-3) ... Selecting previously unselected package libclone-perl:amd64. Preparing to unpack .../134-libclone-perl_0.47-1_amd64.deb ... Unpacking libclone-perl:amd64 (0.47-1) ... Selecting previously unselected package libencode-locale-perl. Preparing to unpack .../135-libencode-locale-perl_1.05-3_all.deb ... Unpacking libencode-locale-perl (1.05-3) ... Selecting previously unselected package libtimedate-perl. Preparing to unpack .../136-libtimedate-perl_2.3300-2_all.deb ... Unpacking libtimedate-perl (2.3300-2) ... Selecting previously unselected package libhttp-date-perl. Preparing to unpack .../137-libhttp-date-perl_6.06-1_all.deb ... Unpacking libhttp-date-perl (6.06-1) ... Selecting previously unselected package libio-html-perl. Preparing to unpack .../138-libio-html-perl_1.004-3_all.deb ... Unpacking libio-html-perl (1.004-3) ... Selecting previously unselected package liblwp-mediatypes-perl. Preparing to unpack .../139-liblwp-mediatypes-perl_6.04-2_all.deb ... Unpacking liblwp-mediatypes-perl (6.04-2) ... Selecting previously unselected package liburi-perl. Preparing to unpack .../140-liburi-perl_5.30-1_all.deb ... Unpacking liburi-perl (5.30-1) ... Selecting previously unselected package libhttp-message-perl. Preparing to unpack .../141-libhttp-message-perl_7.00-2_all.deb ... Unpacking libhttp-message-perl (7.00-2) ... Selecting previously unselected package libparams-util-perl. Preparing to unpack .../142-libparams-util-perl_1.102-3_amd64.deb ... Unpacking libparams-util-perl (1.102-3) ... Selecting previously unselected package libsub-install-perl. Preparing to unpack .../143-libsub-install-perl_0.929-1_all.deb ... Unpacking libsub-install-perl (0.929-1) ... Selecting previously unselected package libdata-optlist-perl. Preparing to unpack .../144-libdata-optlist-perl_0.114-1_all.deb ... Unpacking libdata-optlist-perl (0.114-1) ... Selecting previously unselected package libb-hooks-op-check-perl:amd64. Preparing to unpack .../145-libb-hooks-op-check-perl_0.22-3+b1_amd64.deb ... Unpacking libb-hooks-op-check-perl:amd64 (0.22-3+b1) ... Selecting previously unselected package libdynaloader-functions-perl. Preparing to unpack .../146-libdynaloader-functions-perl_0.004-1_all.deb ... Unpacking libdynaloader-functions-perl (0.004-1) ... Selecting previously unselected package libdevel-callchecker-perl:amd64. Preparing to unpack .../147-libdevel-callchecker-perl_0.009-1_amd64.deb ... Unpacking libdevel-callchecker-perl:amd64 (0.009-1) ... Selecting previously unselected package libparams-classify-perl:amd64. Preparing to unpack .../148-libparams-classify-perl_0.015-2+b3_amd64.deb ... Unpacking libparams-classify-perl:amd64 (0.015-2+b3) ... Selecting previously unselected package libmodule-runtime-perl. Preparing to unpack .../149-libmodule-runtime-perl_0.016-2_all.deb ... Unpacking libmodule-runtime-perl (0.016-2) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../150-libtry-tiny-perl_0.32-1_all.deb ... Unpacking libtry-tiny-perl (0.32-1) ... Selecting previously unselected package libmodule-implementation-perl. Preparing to unpack .../151-libmodule-implementation-perl_0.09-2_all.deb ... Unpacking libmodule-implementation-perl (0.09-2) ... Selecting previously unselected package libpackage-stash-perl. Preparing to unpack .../152-libpackage-stash-perl_0.40-1_all.deb ... Unpacking libpackage-stash-perl (0.40-1) ... Selecting previously unselected package libclass-load-perl. Preparing to unpack .../153-libclass-load-perl_0.25-2_all.deb ... Unpacking libclass-load-perl (0.25-2) ... Selecting previously unselected package libclass-load-xs-perl. Preparing to unpack .../154-libclass-load-xs-perl_0.10-2+b3_amd64.deb ... Unpacking libclass-load-xs-perl (0.10-2+b3) ... Selecting previously unselected package libsub-exporter-progressive-perl. Preparing to unpack .../155-libsub-exporter-progressive-perl_0.001013-3_all.deb ... Unpacking libsub-exporter-progressive-perl (0.001013-3) ... Selecting previously unselected package libdevel-globaldestruction-perl. Preparing to unpack .../156-libdevel-globaldestruction-perl_0.14-4_all.deb ... Unpacking libdevel-globaldestruction-perl (0.14-4) ... Selecting previously unselected package libalgorithm-c3-perl. Preparing to unpack .../157-libalgorithm-c3-perl_0.11-2_all.deb ... Unpacking libalgorithm-c3-perl (0.11-2) ... Selecting previously unselected package libclass-c3-perl. Preparing to unpack .../158-libclass-c3-perl_0.35-2_all.deb ... Unpacking libclass-c3-perl (0.35-2) ... Selecting previously unselected package libmro-compat-perl. Preparing to unpack .../159-libmro-compat-perl_0.15-2_all.deb ... Unpacking libmro-compat-perl (0.15-2) ... Selecting previously unselected package libdevel-overloadinfo-perl. Preparing to unpack .../160-libdevel-overloadinfo-perl_0.007-1_all.deb ... Unpacking libdevel-overloadinfo-perl (0.007-1) ... Selecting previously unselected package libdevel-stacktrace-perl. Preparing to unpack .../161-libdevel-stacktrace-perl_2.0500-1_all.deb ... Unpacking libdevel-stacktrace-perl (2.0500-1) ... Selecting previously unselected package libsub-exporter-perl. Preparing to unpack .../162-libsub-exporter-perl_0.990-1_all.deb ... Unpacking libsub-exporter-perl (0.990-1) ... Selecting previously unselected package libeval-closure-perl. Preparing to unpack .../163-libeval-closure-perl_0.14-3_all.deb ... Unpacking libeval-closure-perl (0.14-3) ... Selecting previously unselected package libdist-checkconflicts-perl. Preparing to unpack .../164-libdist-checkconflicts-perl_0.11-2_all.deb ... Unpacking libdist-checkconflicts-perl (0.11-2) ... Selecting previously unselected package libmodule-runtime-conflicts-perl. Preparing to unpack .../165-libmodule-runtime-conflicts-perl_0.003-2_all.deb ... Unpacking libmodule-runtime-conflicts-perl (0.003-2) ... Selecting previously unselected package libpackage-deprecationmanager-perl. Preparing to unpack .../166-libpackage-deprecationmanager-perl_0.18-1_all.deb ... Unpacking libpackage-deprecationmanager-perl (0.18-1) ... Selecting previously unselected package libpackage-stash-xs-perl:amd64. Preparing to unpack .../167-libpackage-stash-xs-perl_0.30-1+b3_amd64.deb ... Unpacking libpackage-stash-xs-perl:amd64 (0.30-1+b3) ... Selecting previously unselected package libmoose-perl:amd64. Preparing to unpack .../168-libmoose-perl_2.2207-1+b1_amd64.deb ... Unpacking libmoose-perl:amd64 (2.2207-1+b1) ... Selecting previously unselected package libvariable-magic-perl. Preparing to unpack .../169-libvariable-magic-perl_0.64-1_amd64.deb ... Unpacking libvariable-magic-perl (0.64-1) ... Selecting previously unselected package libb-hooks-endofscope-perl. Preparing to unpack .../170-libb-hooks-endofscope-perl_0.28-1_all.deb ... Unpacking libb-hooks-endofscope-perl (0.28-1) ... Selecting previously unselected package libsub-identify-perl. Preparing to unpack .../171-libsub-identify-perl_0.14-3+b2_amd64.deb ... Unpacking libsub-identify-perl (0.14-3+b2) ... Selecting previously unselected package libsub-name-perl:amd64. Preparing to unpack .../172-libsub-name-perl_0.27-1+b2_amd64.deb ... Unpacking libsub-name-perl:amd64 (0.27-1+b2) ... Selecting previously unselected package libnamespace-clean-perl. Preparing to unpack .../173-libnamespace-clean-perl_0.27-2_all.deb ... Unpacking libnamespace-clean-perl (0.27-2) ... Selecting previously unselected package libnghttp3-9:amd64. Preparing to unpack .../174-libnghttp3-9_1.4.0-1_amd64.deb ... Unpacking libnghttp3-9:amd64 (1.4.0-1) ... Selecting previously unselected package libngtcp2-16:amd64. Preparing to unpack .../175-libngtcp2-16_1.6.0-1_amd64.deb ... Unpacking libngtcp2-16:amd64 (1.6.0-1) ... Selecting previously unselected package libngtcp2-crypto-gnutls8:amd64. Preparing to unpack .../176-libngtcp2-crypto-gnutls8_1.6.0-1_amd64.deb ... Unpacking libngtcp2-crypto-gnutls8:amd64 (1.6.0-1) ... Selecting previously unselected package libcurl3t64-gnutls:amd64. Preparing to unpack .../177-libcurl3t64-gnutls_8.10.1-2_amd64.deb ... Unpacking libcurl3t64-gnutls:amd64 (8.10.1-2) ... Selecting previously unselected package libwww-curl-perl:amd64. Preparing to unpack .../178-libwww-curl-perl_4.17-10+b2_amd64.deb ... Unpacking libwww-curl-perl:amd64 (4.17-10+b2) ... Selecting previously unselected package libwww-curl-simple-perl. Preparing to unpack .../179-libwww-curl-simple-perl_0.100191-3_all.deb ... Unpacking libwww-curl-simple-perl (0.100191-3) ... Selecting previously unselected package dh-r. Preparing to unpack .../180-dh-r_20231212_all.deb ... Unpacking dh-r (20231212) ... Selecting previously unselected package fonts-font-awesome. Preparing to unpack .../181-fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb ... Unpacking fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... Selecting previously unselected package fonts-glyphicons-halflings. Preparing to unpack .../182-fonts-glyphicons-halflings_1.009~3.4.1+dfsg-3_all.deb ... Unpacking fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... Selecting previously unselected package fonts-lmodern. Preparing to unpack .../183-fonts-lmodern_2.005-1_all.deb ... Unpacking fonts-lmodern (2.005-1) ... Selecting previously unselected package fonts-mathjax. Preparing to unpack .../184-fonts-mathjax_2.7.9+dfsg-1_all.deb ... Unpacking fonts-mathjax (2.7.9+dfsg-1) ... Selecting previously unselected package javascript-common. Preparing to unpack .../185-javascript-common_11+nmu1_all.deb ... Unpacking javascript-common (11+nmu1) ... Selecting previously unselected package libio-string-perl. Preparing to unpack .../186-libio-string-perl_1.08-4_all.deb ... Unpacking libio-string-perl (1.08-4) ... Selecting previously unselected package liblatex-tounicode-perl. Preparing to unpack .../187-liblatex-tounicode-perl_0.55-1_all.deb ... Unpacking liblatex-tounicode-perl (0.55-1) ... Selecting previously unselected package libbibtex-parser-perl. Preparing to unpack .../188-libbibtex-parser-perl_1.05+dfsg-1_all.deb ... Unpacking libbibtex-parser-perl (1.05+dfsg-1) ... Selecting previously unselected package libboost1.83-dev:amd64. Preparing to unpack .../189-libboost1.83-dev_1.83.0-3.2_amd64.deb ... Unpacking libboost1.83-dev:amd64 (1.83.0-3.2) ... Selecting previously unselected package libboost-dev:amd64. Preparing to unpack .../190-libboost-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libjs-bootstrap. Preparing to unpack .../191-libjs-bootstrap_3.4.1+dfsg-3_all.deb ... Unpacking libjs-bootstrap (3.4.1+dfsg-3) ... Selecting previously unselected package libjs-popper.js. Preparing to unpack .../192-libjs-popper.js_1.16.1+ds-6_all.deb ... Unpacking libjs-popper.js (1.16.1+ds-6) ... Selecting previously unselected package libjs-bootstrap4. Preparing to unpack .../193-libjs-bootstrap4_4.6.1+dfsg1-4_all.deb ... Unpacking libjs-bootstrap4 (4.6.1+dfsg1-4) ... Selecting previously unselected package libjs-d3. Preparing to unpack .../194-libjs-d3_3.5.17-4_all.deb ... Unpacking libjs-d3 (3.5.17-4) ... Selecting previously unselected package libjs-es5-shim. Preparing to unpack .../195-libjs-es5-shim_4.6.7-2_all.deb ... Unpacking libjs-es5-shim (4.6.7-2) ... Selecting previously unselected package libjs-highlight.js. Preparing to unpack .../196-libjs-highlight.js_9.18.5+dfsg1-2_all.deb ... Unpacking libjs-highlight.js (9.18.5+dfsg1-2) ... Selecting previously unselected package libjs-jquery. Preparing to unpack .../197-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Selecting previously unselected package libjs-jquery-datatables. Preparing to unpack .../198-libjs-jquery-datatables_1.11.5+dfsg-2_all.deb ... Unpacking libjs-jquery-datatables (1.11.5+dfsg-2) ... Selecting previously unselected package libjs-sifter.js. Preparing to unpack .../199-libjs-sifter.js_0.6.0+dfsg-3_all.deb ... Unpacking libjs-sifter.js (0.6.0+dfsg-3) ... Selecting previously unselected package libjs-microplugin.js. Preparing to unpack .../200-libjs-microplugin.js_0.0.3+dfsg-1.1_all.deb ... Unpacking libjs-microplugin.js (0.0.3+dfsg-1.1) ... Selecting previously unselected package libjs-jquery-selectize.js. Preparing to unpack .../201-libjs-jquery-selectize.js_0.12.6+dfsg-1.1_all.deb ... Unpacking libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... Selecting previously unselected package libjs-jquery-ui. Preparing to unpack .../202-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... Selecting previously unselected package libjs-json. Preparing to unpack .../203-libjs-json_0~20221030+~1.0.8-1_all.deb ... Unpacking libjs-json (0~20221030+~1.0.8-1) ... Selecting previously unselected package libjs-lunr. Preparing to unpack .../204-libjs-lunr_2.3.9~dfsg-2_all.deb ... Unpacking libjs-lunr (2.3.9~dfsg-2) ... Selecting previously unselected package libjs-mathjax. Preparing to unpack .../205-libjs-mathjax_2.7.9+dfsg-1_all.deb ... Unpacking libjs-mathjax (2.7.9+dfsg-1) ... Selecting previously unselected package libjs-modernizr. Preparing to unpack .../206-libjs-modernizr_3.13.0-0.1_all.deb ... Unpacking libjs-modernizr (3.13.0-0.1) ... Selecting previously unselected package libjs-prettify. Preparing to unpack .../207-libjs-prettify_2015.12.04+dfsg-1.1_all.deb ... Unpacking libjs-prettify (2015.12.04+dfsg-1.1) ... Selecting previously unselected package libjs-twitter-bootstrap-datepicker. Preparing to unpack .../208-libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4.1_all.deb ... Unpacking libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... Selecting previously unselected package libkpathsea6:amd64. Preparing to unpack .../209-libkpathsea6_2024.20240313.70630+ds-4_amd64.deb ... Unpacking libkpathsea6:amd64 (2024.20240313.70630+ds-4) ... Selecting previously unselected package liblua5.4-0:amd64. Preparing to unpack .../210-liblua5.4-0_5.4.6-3+b1_amd64.deb ... Unpacking liblua5.4-0:amd64 (5.4.6-3+b1) ... Selecting previously unselected package libmpfi0:amd64. Preparing to unpack .../211-libmpfi0_1.5.4+ds-3_amd64.deb ... Unpacking libmpfi0:amd64 (1.5.4+ds-3) ... Selecting previously unselected package libpotrace0:amd64. Preparing to unpack .../212-libpotrace0_1.16-2+b1_amd64.deb ... Unpacking libpotrace0:amd64 (1.16-2+b1) ... Selecting previously unselected package libptexenc1:amd64. Preparing to unpack .../213-libptexenc1_2024.20240313.70630+ds-4_amd64.deb ... Unpacking libptexenc1:amd64 (2024.20240313.70630+ds-4) ... Selecting previously unselected package libsynctex2:amd64. Preparing to unpack .../214-libsynctex2_2024.20240313.70630+ds-4_amd64.deb ... Unpacking libsynctex2:amd64 (2024.20240313.70630+ds-4) ... Selecting previously unselected package libteckit0:amd64. Preparing to unpack .../215-libteckit0_2.5.12+ds1-1_amd64.deb ... Unpacking libteckit0:amd64 (2.5.12+ds1-1) ... Selecting previously unselected package libtexlua53-5:amd64. Preparing to unpack .../216-libtexlua53-5_2024.20240313.70630+ds-4_amd64.deb ... Unpacking libtexlua53-5:amd64 (2024.20240313.70630+ds-4) ... Selecting previously unselected package libuv1t64:amd64. Preparing to unpack .../217-libuv1t64_1.48.0-6_amd64.deb ... Unpacking libuv1t64:amd64 (1.48.0-6) ... Selecting previously unselected package libxmu6:amd64. Preparing to unpack .../218-libxmu6_2%3a1.1.3-3+b2_amd64.deb ... Unpacking libxmu6:amd64 (2:1.1.3-3+b2) ... Selecting previously unselected package libxpm4:amd64. Preparing to unpack .../219-libxpm4_1%3a3.5.17-1+b1_amd64.deb ... Unpacking libxpm4:amd64 (1:3.5.17-1+b1) ... Selecting previously unselected package libxaw7:amd64. Preparing to unpack .../220-libxaw7_2%3a1.0.14-1+b2_amd64.deb ... Unpacking libxaw7:amd64 (2:1.0.14-1+b2) ... Selecting previously unselected package libxi6:amd64. Preparing to unpack .../221-libxi6_2%3a1.8.2-1_amd64.deb ... Unpacking libxi6:amd64 (2:1.8.2-1) ... Selecting previously unselected package libyaml-0-2:amd64. Preparing to unpack .../222-libyaml-0-2_0.2.5-1+b1_amd64.deb ... Unpacking libyaml-0-2:amd64 (0.2.5-1+b1) ... Selecting previously unselected package libzzip-0-13t64:amd64. Preparing to unpack .../223-libzzip-0-13t64_0.13.72+dfsg.1-1.2+b1_amd64.deb ... Unpacking libzzip-0-13t64:amd64 (0.13.72+dfsg.1-1.2+b1) ... Selecting previously unselected package r-cran-littler. Preparing to unpack .../224-r-cran-littler_0.3.20-1_amd64.deb ... Unpacking r-cran-littler (0.3.20-1) ... Selecting previously unselected package littler. Preparing to unpack .../225-littler_0.3.20-1_all.deb ... Unpacking littler (0.3.20-1) ... Selecting previously unselected package node-bootstrap-sass. Preparing to unpack .../226-node-bootstrap-sass_3.4.3-2_all.deb ... Unpacking node-bootstrap-sass (3.4.3-2) ... Selecting previously unselected package node-html5shiv. Preparing to unpack .../227-node-html5shiv_3.7.3+dfsg-5_all.deb ... Unpacking node-html5shiv (3.7.3+dfsg-5) ... Selecting previously unselected package node-normalize.css. Preparing to unpack .../228-node-normalize.css_8.0.1-5_all.deb ... Unpacking node-normalize.css (8.0.1-5) ... Selecting previously unselected package pandoc-data. Preparing to unpack .../229-pandoc-data_3.1.3-3_all.deb ... Unpacking pandoc-data (3.1.3-3) ... Selecting previously unselected package pandoc. Preparing to unpack .../230-pandoc_3.1.3+ds-3+b1_amd64.deb ... Unpacking pandoc (3.1.3+ds-3+b1) ... Selecting previously unselected package r-bioc-biocgenerics. Preparing to unpack .../231-r-bioc-biocgenerics_0.50.0-2_all.deb ... Unpacking r-bioc-biocgenerics (0.50.0-2) ... Selecting previously unselected package r-bioc-biobase. Preparing to unpack .../232-r-bioc-biobase_2.64.0-4_amd64.deb ... Unpacking r-bioc-biobase (2.64.0-4) ... Selecting previously unselected package r-bioc-s4vectors. Preparing to unpack .../233-r-bioc-s4vectors_0.42.1+dfsg-2_amd64.deb ... Unpacking r-bioc-s4vectors (0.42.1+dfsg-2) ... Selecting previously unselected package r-bioc-iranges. Preparing to unpack .../234-r-bioc-iranges_2.38.1-1_amd64.deb ... Unpacking r-bioc-iranges (2.38.1-1) ... Selecting previously unselected package r-cran-dbi. Preparing to unpack .../235-r-cran-dbi_1.2.3-1_all.deb ... Unpacking r-cran-dbi (1.2.3-1) ... Selecting previously unselected package r-cran-bit. Preparing to unpack .../236-r-cran-bit_4.0.5-1_amd64.deb ... Unpacking r-cran-bit (4.0.5-1) ... Selecting previously unselected package r-cran-bit64. Preparing to unpack .../237-r-cran-bit64_4.0.5-1_amd64.deb ... Unpacking r-cran-bit64 (4.0.5-1) ... Selecting previously unselected package r-cran-rlang. Preparing to unpack .../238-r-cran-rlang_1.1.4-1_amd64.deb ... Unpacking r-cran-rlang (1.1.4-1) ... Selecting previously unselected package r-cran-cli. Preparing to unpack .../239-r-cran-cli_3.6.3-1_amd64.deb ... Unpacking r-cran-cli (3.6.3-1) ... Selecting previously unselected package r-cran-glue. Preparing to unpack .../240-r-cran-glue_1.7.0-1_amd64.deb ... Unpacking r-cran-glue (1.7.0-1) ... Selecting previously unselected package r-cran-lifecycle. Preparing to unpack .../241-r-cran-lifecycle_1.0.4+dfsg-1_all.deb ... Unpacking r-cran-lifecycle (1.0.4+dfsg-1) ... Selecting previously unselected package r-cran-vctrs. Preparing to unpack .../242-r-cran-vctrs_0.6.5-1_amd64.deb ... Unpacking r-cran-vctrs (0.6.5-1) ... Selecting previously unselected package r-cran-blob. Preparing to unpack .../243-r-cran-blob_1.2.4-1_all.deb ... Unpacking r-cran-blob (1.2.4-1) ... Selecting previously unselected package r-cran-fastmap. Preparing to unpack .../244-r-cran-fastmap_1.2.0-1_amd64.deb ... Unpacking r-cran-fastmap (1.2.0-1) ... Selecting previously unselected package r-cran-cachem. Preparing to unpack .../245-r-cran-cachem_1.1.0-1_amd64.deb ... Unpacking r-cran-cachem (1.1.0-1) ... Selecting previously unselected package r-cran-memoise. Preparing to unpack .../246-r-cran-memoise_2.0.1-1_all.deb ... Unpacking r-cran-memoise (2.0.1-1) ... Selecting previously unselected package r-cran-pkgconfig. Preparing to unpack .../247-r-cran-pkgconfig_2.0.3-2_all.deb ... Unpacking r-cran-pkgconfig (2.0.3-2) ... Selecting previously unselected package r-cran-plogr. Preparing to unpack .../248-r-cran-plogr_0.2.0-3_all.deb ... Unpacking r-cran-plogr (0.2.0-3) ... Selecting previously unselected package r-cran-cpp11. Preparing to unpack .../249-r-cran-cpp11_0.5.0-1_all.deb ... Unpacking r-cran-cpp11 (0.5.0-1) ... Selecting previously unselected package r-cran-rsqlite. Preparing to unpack .../250-r-cran-rsqlite_2.3.7-2_amd64.deb ... Unpacking r-cran-rsqlite (2.3.7-2) ... Selecting previously unselected package r-cran-curl. Preparing to unpack .../251-r-cran-curl_5.2.3+dfsg-1_amd64.deb ... Unpacking r-cran-curl (5.2.3+dfsg-1) ... Selecting previously unselected package r-cran-jsonlite. Preparing to unpack .../252-r-cran-jsonlite_1.8.9+dfsg-1_amd64.deb ... Unpacking r-cran-jsonlite (1.8.9+dfsg-1) ... Selecting previously unselected package r-cran-mime. Preparing to unpack .../253-r-cran-mime_0.12-2_amd64.deb ... Unpacking r-cran-mime (0.12-2) ... Selecting previously unselected package r-cran-sys. Preparing to unpack .../254-r-cran-sys_3.4.3-1_amd64.deb ... Unpacking r-cran-sys (3.4.3-1) ... Selecting previously unselected package r-cran-askpass. Preparing to unpack .../255-r-cran-askpass_1.2.1-1_amd64.deb ... Unpacking r-cran-askpass (1.2.1-1) ... Selecting previously unselected package r-cran-openssl. Preparing to unpack .../256-r-cran-openssl_2.2.0+dfsg-1_amd64.deb ... Unpacking r-cran-openssl (2.2.0+dfsg-1) ... Selecting previously unselected package r-cran-r6. Preparing to unpack .../257-r-cran-r6_2.5.1-1_all.deb ... Unpacking r-cran-r6 (2.5.1-1) ... Selecting previously unselected package r-cran-httr. Preparing to unpack .../258-r-cran-httr_1.4.7+dfsg-1_all.deb ... Unpacking r-cran-httr (1.4.7+dfsg-1) ... Selecting previously unselected package r-cran-png. Preparing to unpack .../259-r-cran-png_0.1-8-1+b1_amd64.deb ... Unpacking r-cran-png (0.1-8-1+b1) ... Selecting previously unselected package r-bioc-zlibbioc. Preparing to unpack .../260-r-bioc-zlibbioc_1.50.0+dfsg-2_all.deb ... Unpacking r-bioc-zlibbioc (1.50.0+dfsg-2) ... Selecting previously unselected package r-bioc-xvector. Preparing to unpack .../261-r-bioc-xvector_0.44.0-1_amd64.deb ... Unpacking r-bioc-xvector (0.44.0-1) ... Selecting previously unselected package r-bioc-ucsc.utils. Preparing to unpack .../262-r-bioc-ucsc.utils_1.0.0+ds-2_all.deb ... Unpacking r-bioc-ucsc.utils (1.0.0+ds-2) ... Selecting previously unselected package r-bioc-genomeinfodbdata. Preparing to unpack .../263-r-bioc-genomeinfodbdata_1.2.12-1_all.deb ... Unpacking r-bioc-genomeinfodbdata (1.2.12-1) ... Selecting previously unselected package r-bioc-genomeinfodb. Preparing to unpack .../264-r-bioc-genomeinfodb_1.40.1+dfsg-1_all.deb ... Unpacking r-bioc-genomeinfodb (1.40.1+dfsg-1) ... Selecting previously unselected package r-cran-crayon. Preparing to unpack .../265-r-cran-crayon_1.5.2-1_all.deb ... Unpacking r-cran-crayon (1.5.2-1) ... Selecting previously unselected package r-bioc-biostrings. Preparing to unpack .../266-r-bioc-biostrings_2.72.1+dfsg-1_amd64.deb ... Unpacking r-bioc-biostrings (2.72.1+dfsg-1) ... Selecting previously unselected package r-bioc-keggrest. Preparing to unpack .../267-r-bioc-keggrest_1.44.1+dfsg-1_all.deb ... Unpacking r-bioc-keggrest (1.44.1+dfsg-1) ... Selecting previously unselected package r-bioc-annotationdbi. Preparing to unpack .../268-r-bioc-annotationdbi_1.66.0-1_all.deb ... Unpacking r-bioc-annotationdbi (1.66.0-1) ... Selecting previously unselected package r-bioc-genomicranges. Preparing to unpack .../269-r-bioc-genomicranges_1.56.1+dfsg-1_amd64.deb ... Unpacking r-bioc-genomicranges (1.56.1+dfsg-1) ... Selecting previously unselected package r-cran-lazyeval. Preparing to unpack .../270-r-cran-lazyeval_0.2.2-1+b1_amd64.deb ... Unpacking r-cran-lazyeval (0.2.2-1+b1) ... Selecting previously unselected package r-bioc-annotationfilter. Preparing to unpack .../271-r-bioc-annotationfilter_1.28.0+dfsg-1_all.deb ... Unpacking r-bioc-annotationfilter (1.28.0+dfsg-1) ... Selecting previously unselected package r-bioc-biocio. Preparing to unpack .../272-r-bioc-biocio_1.14.0+dfsg-1_all.deb ... Unpacking r-bioc-biocio (1.14.0+dfsg-1) ... Selecting previously unselected package r-cran-formatr. Preparing to unpack .../273-r-cran-formatr_1.14-2_all.deb ... Unpacking r-cran-formatr (1.14-2) ... Selecting previously unselected package r-cran-lambda.r. Preparing to unpack .../274-r-cran-lambda.r_1.2.4-2_all.deb ... Unpacking r-cran-lambda.r (1.2.4-2) ... Selecting previously unselected package r-cran-futile.options. Preparing to unpack .../275-r-cran-futile.options_1.0.1-3_all.deb ... Unpacking r-cran-futile.options (1.0.1-3) ... Selecting previously unselected package r-cran-futile.logger. Preparing to unpack .../276-r-cran-futile.logger_1.4.3-4_all.deb ... Unpacking r-cran-futile.logger (1.4.3-4) ... Selecting previously unselected package r-cran-snow. Preparing to unpack .../277-r-cran-snow_1%3a0.4.4-2_all.deb ... Unpacking r-cran-snow (1:0.4.4-2) ... Selecting previously unselected package r-cran-codetools. Preparing to unpack .../278-r-cran-codetools_0.2-20-1_all.deb ... Unpacking r-cran-codetools (0.2-20-1) ... Selecting previously unselected package r-cran-bh. Preparing to unpack .../279-r-cran-bh_1.84.0-1_all.deb ... Unpacking r-cran-bh (1.84.0-1) ... Selecting previously unselected package r-bioc-biocparallel. Preparing to unpack .../280-r-bioc-biocparallel_1.38.0-2_amd64.deb ... Unpacking r-bioc-biocparallel (1.38.0-2) ... Selecting previously unselected package r-cran-base64enc. Preparing to unpack .../281-r-cran-base64enc_0.1-3-3_amd64.deb ... Unpacking r-cran-base64enc (0.1-3-3) ... Selecting previously unselected package r-cran-digest. Preparing to unpack .../282-r-cran-digest_0.6.37-1_amd64.deb ... Unpacking r-cran-digest (0.6.37-1) ... Selecting previously unselected package r-cran-htmltools. Preparing to unpack .../283-r-cran-htmltools_0.5.8.1-1_amd64.deb ... Unpacking r-cran-htmltools (0.5.8.1-1) ... Selecting previously unselected package r-cran-evaluate. Preparing to unpack .../284-r-cran-evaluate_1.0.0-1_all.deb ... Unpacking r-cran-evaluate (1.0.0-1) ... Selecting previously unselected package r-cran-xfun. Preparing to unpack .../285-r-cran-xfun_0.48+dfsg-1_amd64.deb ... Unpacking r-cran-xfun (0.48+dfsg-1) ... Selecting previously unselected package r-cran-highr. Preparing to unpack .../286-r-cran-highr_0.11+dfsg-1_all.deb ... Unpacking r-cran-highr (0.11+dfsg-1) ... Selecting previously unselected package r-cran-yaml. Preparing to unpack .../287-r-cran-yaml_2.3.10-1_amd64.deb ... Unpacking r-cran-yaml (2.3.10-1) ... Selecting previously unselected package r-cran-knitr. Preparing to unpack .../288-r-cran-knitr_1.48+dfsg-1_all.deb ... Unpacking r-cran-knitr (1.48+dfsg-1) ... Selecting previously unselected package r-cran-jquerylib. Preparing to unpack .../289-r-cran-jquerylib_0.1.4+dfsg-4_all.deb ... Unpacking r-cran-jquerylib (0.1.4+dfsg-4) ... Selecting previously unselected package r-cran-fs. Preparing to unpack .../290-r-cran-fs_1.6.4+dfsg-1_amd64.deb ... Unpacking r-cran-fs (1.6.4+dfsg-1) ... Selecting previously unselected package r-cran-rappdirs. Preparing to unpack .../291-r-cran-rappdirs_0.3.3-1_amd64.deb ... Unpacking r-cran-rappdirs (0.3.3-1) ... Selecting previously unselected package r-cran-sass. Preparing to unpack .../292-r-cran-sass_0.4.9+dfsg-1_amd64.deb ... Unpacking r-cran-sass (0.4.9+dfsg-1) ... Selecting previously unselected package r-cran-bslib. Preparing to unpack .../293-r-cran-bslib_0.7.0+dfsg-1_all.deb ... Unpacking r-cran-bslib (0.7.0+dfsg-1) ... Selecting previously unselected package r-cran-fontawesome. Preparing to unpack .../294-r-cran-fontawesome_0.5.2-1_all.deb ... Unpacking r-cran-fontawesome (0.5.2-1) ... Selecting previously unselected package r-cran-tinytex. Preparing to unpack .../295-r-cran-tinytex_0.53-1_all.deb ... Unpacking r-cran-tinytex (0.53-1) ... Selecting previously unselected package r-cran-pkgkitten. Preparing to unpack .../296-r-cran-pkgkitten_0.2.4-1_all.deb ... Unpacking r-cran-pkgkitten (0.2.4-1) ... Selecting previously unselected package r-cran-rcpp. Preparing to unpack .../297-r-cran-rcpp_1.0.13-1_amd64.deb ... Unpacking r-cran-rcpp (1.0.13-1) ... Selecting previously unselected package r-cran-later. Preparing to unpack .../298-r-cran-later_1.3.2+dfsg-1_amd64.deb ... Unpacking r-cran-later (1.3.2+dfsg-1) ... Selecting previously unselected package r-cran-magrittr. Preparing to unpack .../299-r-cran-magrittr_2.0.3-1_amd64.deb ... Unpacking r-cran-magrittr (2.0.3-1) ... Selecting previously unselected package r-cran-promises. Preparing to unpack .../300-r-cran-promises_1.3.0+dfsg-1_amd64.deb ... Unpacking r-cran-promises (1.3.0+dfsg-1) ... Selecting previously unselected package r-cran-httpuv. Preparing to unpack .../301-r-cran-httpuv_1.6.15+dfsg-1_amd64.deb ... Unpacking r-cran-httpuv (1.6.15+dfsg-1) ... Selecting previously unselected package r-cran-xtable. Preparing to unpack .../302-r-cran-xtable_1%3a1.8-4-2_all.deb ... Unpacking r-cran-xtable (1:1.8-4-2) ... Selecting previously unselected package r-cran-sourcetools. Preparing to unpack .../303-r-cran-sourcetools_0.1.7-1-1_amd64.deb ... Unpacking r-cran-sourcetools (0.1.7-1-1) ... Selecting previously unselected package r-cran-withr. Preparing to unpack .../304-r-cran-withr_3.0.1+dfsg-1_all.deb ... Unpacking r-cran-withr (3.0.1+dfsg-1) ... Selecting previously unselected package r-cran-commonmark. Preparing to unpack .../305-r-cran-commonmark_1.9.1-1_amd64.deb ... Unpacking r-cran-commonmark (1.9.1-1) ... Selecting previously unselected package r-cran-shiny. Preparing to unpack .../306-r-cran-shiny_1.9.1+dfsg-1_all.deb ... Unpacking r-cran-shiny (1.9.1+dfsg-1) ... Selecting previously unselected package r-cran-rmarkdown. Preparing to unpack .../307-r-cran-rmarkdown_2.28+dfsg-1_all.deb ... Unpacking r-cran-rmarkdown (2.28+dfsg-1) ... Selecting previously unselected package r-cran-bookdown. Preparing to unpack .../308-r-cran-bookdown_0.40+dfsg-1_all.deb ... Unpacking r-cran-bookdown (0.40+dfsg-1) ... Selecting previously unselected package r-cran-biocmanager. Preparing to unpack .../309-r-cran-biocmanager_1.30.25+dfsg-1_all.deb ... Unpacking r-cran-biocmanager (1.30.25+dfsg-1) ... Selecting previously unselected package tex-common. Preparing to unpack .../310-tex-common_6.18_all.deb ... Unpacking tex-common (6.18) ... Selecting previously unselected package t1utils. Preparing to unpack .../311-t1utils_1.41-4_amd64.deb ... Unpacking t1utils (1.41-4) ... Selecting previously unselected package texlive-binaries. Preparing to unpack .../312-texlive-binaries_2024.20240313.70630+ds-4_amd64.deb ... Unpacking texlive-binaries (2024.20240313.70630+ds-4) ... Selecting previously unselected package texlive-base. Preparing to unpack .../313-texlive-base_2024.20240829-2_all.deb ... Unpacking texlive-base (2024.20240829-2) ... Selecting previously unselected package texlive-latex-base. Preparing to unpack .../314-texlive-latex-base_2024.20240829-2_all.deb ... Unpacking texlive-latex-base (2024.20240829-2) ... Selecting previously unselected package texlive-bibtex-extra. Preparing to unpack .../315-texlive-bibtex-extra_2024.20240829-1_all.deb ... Unpacking texlive-bibtex-extra (2024.20240829-1) ... Selecting previously unselected package r-bioc-biocversion. Preparing to unpack .../316-r-bioc-biocversion_3.19.1-1_all.deb ... Unpacking r-bioc-biocversion (3.19.1-1) ... Selecting previously unselected package r-bioc-biocstyle. Preparing to unpack .../317-r-bioc-biocstyle_2.32.1+dfsg-1_all.deb ... Unpacking r-bioc-biocstyle (2.32.1+dfsg-1) ... Selecting previously unselected package r-cran-lattice. Preparing to unpack .../318-r-cran-lattice_0.22-6-1_amd64.deb ... Unpacking r-cran-lattice (0.22-6-1) ... Selecting previously unselected package r-cran-matrix. Preparing to unpack .../319-r-cran-matrix_1.7-0-3_amd64.deb ... Unpacking r-cran-matrix (1.7-0-3) ... Selecting previously unselected package r-cran-matrixstats. Preparing to unpack .../320-r-cran-matrixstats_1.4.1-1_amd64.deb ... Unpacking r-cran-matrixstats (1.4.1-1) ... Selecting previously unselected package r-bioc-matrixgenerics. Preparing to unpack .../321-r-bioc-matrixgenerics_1.16.0-2_all.deb ... Unpacking r-bioc-matrixgenerics (1.16.0-2) ... Selecting previously unselected package r-cran-abind. Preparing to unpack .../322-r-cran-abind_1.4-8-1_all.deb ... Unpacking r-cran-abind (1.4-8-1) ... Selecting previously unselected package r-bioc-s4arrays. Preparing to unpack .../323-r-bioc-s4arrays_1.4.1+dfsg-1_amd64.deb ... Unpacking r-bioc-s4arrays (1.4.1+dfsg-1) ... Selecting previously unselected package r-bioc-sparsearray. Preparing to unpack .../324-r-bioc-sparsearray_1.4.8+dfsg-1_amd64.deb ... Unpacking r-bioc-sparsearray (1.4.8+dfsg-1) ... Selecting previously unselected package r-bioc-delayedarray. Preparing to unpack .../325-r-bioc-delayedarray_0.30.1+dfsg-1_amd64.deb ... Unpacking r-bioc-delayedarray (0.30.1+dfsg-1) ... Selecting previously unselected package r-bioc-summarizedexperiment. Preparing to unpack .../326-r-bioc-summarizedexperiment_1.34.0+dfsg-1_all.deb ... Unpacking r-bioc-summarizedexperiment (1.34.0+dfsg-1) ... Selecting previously unselected package r-cran-bitops. Preparing to unpack .../327-r-cran-bitops_1.0-8-1_amd64.deb ... Unpacking r-cran-bitops (1.0-8-1) ... Selecting previously unselected package r-bioc-rhtslib. Preparing to unpack .../328-r-bioc-rhtslib_3.0.0+dfsg-1_amd64.deb ... Unpacking r-bioc-rhtslib (3.0.0+dfsg-1) ... Selecting previously unselected package r-bioc-rsamtools. Preparing to unpack .../329-r-bioc-rsamtools_2.20.0+dfsg-1_amd64.deb ... Unpacking r-bioc-rsamtools (2.20.0+dfsg-1) ... Selecting previously unselected package r-bioc-genomicalignments. Preparing to unpack .../330-r-bioc-genomicalignments_1.40.0-1_amd64.deb ... Unpacking r-bioc-genomicalignments (1.40.0-1) ... Selecting previously unselected package r-cran-xml. Preparing to unpack .../331-r-cran-xml_3.99-0.17-1_amd64.deb ... Unpacking r-cran-xml (3.99-0.17-1) ... Selecting previously unselected package r-cran-rcurl. Preparing to unpack .../332-r-cran-rcurl_1.98-1.16+dfsg-1_amd64.deb ... Unpacking r-cran-rcurl (1.98-1.16+dfsg-1) ... Selecting previously unselected package r-cran-rjson. Preparing to unpack .../333-r-cran-rjson_0.2.23-1_amd64.deb ... Unpacking r-cran-rjson (0.2.23-1) ... Selecting previously unselected package r-cran-restfulr. Preparing to unpack .../334-r-cran-restfulr_0.0.15-1_amd64.deb ... Unpacking r-cran-restfulr (0.0.15-1) ... Selecting previously unselected package r-bioc-rtracklayer. Preparing to unpack .../335-r-bioc-rtracklayer_1.64.0-1_amd64.deb ... Unpacking r-bioc-rtracklayer (1.64.0-1) ... Selecting previously unselected package r-bioc-genomicfeatures. Preparing to unpack .../336-r-bioc-genomicfeatures_1.56.0+dfsg-1_all.deb ... Unpacking r-bioc-genomicfeatures (1.56.0+dfsg-1) ... Selecting previously unselected package r-bioc-protgenerics. Preparing to unpack .../337-r-bioc-protgenerics_1.36.0-1_all.deb ... Unpacking r-bioc-protgenerics (1.36.0-1) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up libjs-json (0~20221030+~1.0.8-1) ... Setting up javascript-common (11+nmu1) ... Setting up libgraphite2-3:amd64 (1.3.14-2) ... Setting up libpixman-1-0:amd64 (0.42.2-1+b1) ... Setting up libsharpyuv0:amd64 (1.4.0-0.1) ... Setting up libfile-which-perl (1.27-2) ... Setting up libxau6:amd64 (1:1.0.9-1+b1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3+b1) ... Setting up libkeyutils1:amd64 (1.6.3-3) ... Setting up libboost1.83-dev:amd64 (1.83.0-3.2) ... Setting up libxcb1:amd64 (1.17.0-2) ... Setting up fonts-mathjax (2.7.9+dfsg-1) ... Setting up libicu72:amd64 (72.1-5) ... Setting up liblerc4:amd64 (4.0.0+ds-4+b1) ... Setting up bsdextrautils (2.40.2-9) ... Setting up libjs-mathjax (2.7.9+dfsg-1) ... Setting up libdynaloader-functions-perl (0.004-1) ... Setting up libdatrie1:amd64 (0.2.13-3) ... Setting up libjs-popper.js (1.16.1+ds-6) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libxcb-render0:amd64 (1.17.0-2) ... Setting up libclone-perl:amd64 (0.47-1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libyaml-0-2:amd64 (0.2.5-1+b1) ... Setting up libsub-identify-perl (0.14-3+b2) ... Setting up libjs-sifter.js (0.6.0+dfsg-3) ... Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... Setting up libtirpc-common (1.3.4+ds-1.3) ... Setting up libjs-lunr (2.3.9~dfsg-2) ... Setting up unzip (6.0-28) ... Setting up libdebhelper-perl (13.20) ... Setting up libbrotli1:amd64 (1.1.0-2+b4) ... Setting up liblatex-tounicode-perl (0.55-1) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libuv1t64:amd64 (1.48.0-6) ... Setting up libmagic1t64:amd64 (1:5.45-3) ... Setting up x11-common (1:7.7+23.1) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: WARNING: No init system and policy-rc.d missing! Defaulting to block. Setting up libtry-tiny-perl (0.32-1) ... Setting up node-html5shiv (3.7.3+dfsg-5) ... Setting up libpsl5t64:amd64 (0.21.2-1.1) ... Setting up libnghttp2-14:amd64 (1.63.0-1) ... Setting up libdeflate0:amd64 (1.22-1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libjs-microplugin.js (0.0.3+dfsg-1.1) ... Setting up libxcb-shm0:amd64 (1.17.0-2) ... Setting up file (1:5.45-3) ... Setting up libjs-modernizr (3.13.0-0.1) ... Setting up libjbig0:amd64 (2.1-6.1+b1) ... Setting up libpcre2-16-0:amd64 (10.42-4+b1) ... Setting up libsub-install-perl (0.929-1) ... Setting up libelf1t64:amd64 (0.191-2) ... Setting up libkrb5support0:amd64 (1.21.3-3) ... Setting up libjs-es5-shim (4.6.7-2) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-8) ... Setting up libio-string-perl (1.08-4) ... Setting up zip (3.0-14) ... Setting up libpackage-stash-xs-perl:amd64 (0.30-1+b3) ... Setting up autotools-dev (20220109.1) ... Setting up libpcre2-32-0:amd64 (10.42-4+b1) ... Setting up libglib2.0-0t64:amd64 (2.82.1-1) ... No schema files found: doing nothing. Setting up libblas3:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libpkgconf3:amd64 (1.8.1-3) ... Setting up libalgorithm-c3-perl (0.11-2) ... Setting up libjpeg62-turbo:amd64 (1:2.1.5-3) ... Setting up libswitch-perl (2.17-3) ... Setting up libzzip-0-13t64:amd64 (0.13.72+dfsg.1-1.2+b1) ... Setting up libx11-data (2:1.8.7-1) ... Setting up libjpeg62-turbo-dev:amd64 (1:2.1.5-3) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up libteckit0:amd64 (2.5.12+ds1-1) ... Setting up libncurses6:amd64 (6.5-2) ... Setting up libfribidi0:amd64 (1.0.15-1) ... Setting up t1utils (1.41-4) ... Setting up libtexlua53-5:amd64 (2024.20240313.70630+ds-4) ... Setting up libjs-d3 (3.5.17-4) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:amd64 (1.6.44-2) ... Setting up libvariable-magic-perl (0.64-1) ... Setting up libio-html-perl (1.004-3) ... Setting up libtcl8.6:amd64 (8.6.15+dfsg-2) ... Setting up autopoint (0.22.5-2) ... Setting up libb-hooks-op-check-perl:amd64 (0.22-3+b1) ... Setting up libmpfi0:amd64 (1.5.4+ds-3) ... Setting up icu-devtools (72.1-5) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up pkgconf-bin (1.8.1-3) ... Setting up libncursesw6:amd64 (6.5-2) ... Setting up libk5crypto3:amd64 (1.21.3-3) ... Setting up libparams-util-perl (1.102-3) ... Setting up libkpathsea6:amd64 (2024.20240313.70630+ds-4) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-8) ... Setting up libgfortran5:amd64 (14.2.0-6) ... Setting up autoconf (2.72-3) ... Setting up libnghttp3-9:amd64 (1.4.0-1) ... Setting up libsub-exporter-progressive-perl (0.001013-3) ... Setting up libwebp7:amd64 (1.4.0-0.1) ... Setting up libtimedate-perl (2.3300-2) ... Setting up liblzma-dev:amd64 (5.6.2-2) ... Setting up libsub-name-perl:amd64 (0.27-1+b2) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1) ... Setting up libpcre2-posix3:amd64 (10.42-4+b1) ... Setting up dwz (0.15-1+b1) ... Setting up libjs-highlight.js (9.18.5+dfsg1-2) ... Setting up sensible-utils (0.0.24) ... Setting up libtiff6:amd64 (4.5.1+git230720-5) ... Setting up libuchardet0:amd64 (0.0.8-1+b1) ... Setting up fonts-lmodern (2.005-1) ... Setting up liblua5.4-0:amd64 (5.4.6-3+b1) ... Setting up libx11-6:amd64 (2:1.8.7-1+b1) ... Setting up libthai-data (0.1.29-2) ... Setting up libdevel-globaldestruction-perl (0.14-4) ... Setting up node-bootstrap-sass (3.4.3-2) ... Setting up libngtcp2-16:amd64 (1.6.0-1) ... Setting up libjs-prettify (2015.12.04+dfsg-1.1) ... Setting up libdevel-stacktrace-perl (2.0500-1) ... Setting up libkrb5-3:amd64 (1.21.3-3) ... Setting up libboost-dev:amd64 (1.83.0.2+b2) ... Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ... Setting up libssh2-1t64:amd64 (1.11.0-7) ... Setting up pandoc-data (3.1.3-3) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libdeflate-dev:amd64 (1.22-1) ... Setting up node-normalize.css (8.0.1-5) ... Setting up readline-common (8.2-5) ... Setting up libicu-dev:amd64 (72.1-5) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.1) ... Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... Setting up xdg-utils (1.1.3-4.1) ... update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode Setting up liburi-perl (5.30-1) ... Setting up libxmuu1:amd64 (2:1.1.3-3+b2) ... Setting up libngtcp2-crypto-gnutls8:amd64 (1.6.0-1) ... Setting up libblas-dev:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode Setting up dctrl-tools (2.24-3+b1) ... Setting up libjs-bootstrap (3.4.1+dfsg-3) ... Setting up libsynctex2:amd64 (2024.20240313.70630+ds-4) ... Setting up libbz2-dev:amd64 (1.0.8-6) ... Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... Setting up libpotrace0:amd64 (1.16-2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libgfortran-14-dev:amd64 (14.2.0-6) ... Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up libice6:amd64 (2:1.0.10-1+b1) ... Setting up libhttp-date-perl (6.06-1) ... Setting up liblapack3:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libncurses-dev:amd64 (6.5-2) ... Setting up gettext (0.22.5-2) ... Setting up libxpm4:amd64 (1:3.5.17-1+b1) ... Setting up libpcre2-dev:amd64 (10.42-4+b1) ... Setting up libxrender1:amd64 (1:0.9.10-1.1+b1) ... Setting up libtool (2.4.7-7) ... Setting up fontconfig-config (2.15.0-1.1) ... Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... Setting up libpng-dev:amd64 (1.6.44-2) ... Setting up libjpeg-dev:amd64 (1:2.1.5-3) ... Setting up libxext6:amd64 (2:1.3.4-1+b2) ... Setting up libclass-c3-perl (0.35-2) ... Setting up libbibtex-parser-perl (1.05+dfsg-1) ... Setting up libdevel-callchecker-perl:amd64 (0.009-1) ... Setting up libldap-2.5-0:amd64 (2.5.18+dfsg-3) ... Setting up gfortran-14-x86-64-linux-gnu (14.2.0-6) ... Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... Setting up pkgconf:amd64 (1.8.1-3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libthai0:amd64 (0.1.29-2) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libptexenc1:amd64 (2024.20240313.70630+ds-4) ... Setting up pandoc (3.1.3+ds-3+b1) ... Setting up libfreetype6:amd64 (2.13.3+dfsg-1) ... Setting up liblapack-dev:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ... Setting up libdata-optlist-perl (0.114-1) ... Setting up ucf (3.0043+nmu1) ... Setting up libreadline8t64:amd64 (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up xauth (1:1.1.2-1) ... Setting up groff-base (1.23.0-5) ... Setting up libharfbuzz0b:amd64 (9.0.0-1) ... Setting up libxss1:amd64 (1:1.2.3-1+b1) ... Setting up libfontconfig1:amd64 (2.15.0-1.1) ... Setting up libmro-compat-perl (0.15-2) ... Setting up gfortran-14 (14.2.0-6) ... Setting up libsm6:amd64 (2:1.2.3-1+b1) ... Setting up libsub-exporter-perl (0.990-1) ... Setting up libhttp-message-perl (7.00-2) ... Setting up libeval-closure-perl (0.14-3) ... Setting up libpaper1:amd64 (1.1.29+b1) ... Creating config file /etc/papersize with new version Setting up fontconfig (2.15.0-1.1) ... Regenerating fonts cache... done. Setting up libxft2:amd64 (2.3.6-1+b1) ... Setting up libxi6:amd64 (2:1.8.2-1) ... Setting up libcurl4t64:amd64 (8.10.1-2) ... Setting up libtirpc3t64:amd64 (1.3.4+ds-1.3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libtk8.6:amd64 (8.6.15-1) ... Setting up libparams-classify-perl:amd64 (0.015-2+b3) ... Setting up libpango-1.0-0:amd64 (1.54.0+ds-2) ... Setting up libcurl3t64-gnutls:amd64 (8.10.1-2) ... Setting up libwww-curl-perl:amd64 (4.17-10+b2) ... Setting up libpaper-utils (1.1.29+b1) ... Setting up libreadline-dev:amd64 (8.2-5) ... Setting up man-db (2.13.0-1) ... Building database of manual pages ... Setting up gfortran-x86-64-linux-gnu (4:14.2.0-1) ... Setting up gfortran (4:14.2.0-1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libcairo2:amd64 (1.18.2-2) ... Setting up tex-common (6.18) ... update-language: texlive-base not installed and configured, doing nothing! Setting up libtirpc-dev:amd64 (1.3.4+ds-1.3) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libxt6t64:amd64 (1:1.2.1-1.2) ... Setting up libdist-checkconflicts-perl (0.11-2) ... Setting up libpangoft2-1.0-0:amd64 (1.54.0+ds-2) ... Setting up libpangocairo-1.0-0:amd64 (1.54.0+ds-2) ... Setting up libxmu6:amd64 (2:1.1.3-3+b2) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up debhelper (13.20) ... Setting up libmodule-runtime-conflicts-perl (0.003-2) ... Setting up libxaw7:amd64 (2:1.0.14-1+b2) ... Setting up libclass-load-perl (0.25-2) ... Setting up r-base-core (4.4.1-3) ... Creating config file /etc/R/Renviron with new version Setting up r-cran-crayon (1.5.2-1) ... Setting up r-cran-sourcetools (0.1.7-1-1) ... Setting up r-cran-futile.options (1.0.1-3) ... Setting up r-cran-lattice (0.22-6-1) ... Setting up r-cran-formatr (1.14-2) ... Setting up r-cran-xml (3.99-0.17-1) ... Setting up libpackage-deprecationmanager-perl (0.18-1) ... Setting up texlive-binaries (2024.20240313.70630+ds-4) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up libdevel-overloadinfo-perl (0.007-1) ... Setting up libclass-load-xs-perl (0.10-2+b3) ... Setting up r-cran-lazyeval (0.2.2-1+b1) ... Setting up r-cran-commonmark (1.9.1-1) ... Setting up r-cran-rjson (0.2.23-1) ... Setting up r-cran-r6 (2.5.1-1) ... Setting up r-cran-pkgkitten (0.2.4-1) ... Setting up libb-hooks-endofscope-perl (0.28-1) ... Setting up texlive-base (2024.20240829-2) ... mktexlsr: Updating /var/lib/texmf/ls-R-TEXLIVEDIST... mktexlsr: Updating /var/lib/texmf/ls-R-TEXMFMAIN... mktexlsr: Updating /var/lib/texmf/ls-R... mktexlsr: Done. tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex Setting up r-cran-magrittr (2.0.3-1) ... Setting up r-cran-rappdirs (0.3.3-1) ... Setting up r-bioc-genomeinfodbdata (1.2.12-1) ... Setting up r-cran-littler (0.3.20-1) ... Setting up r-cran-bh (1.84.0-1) ... Setting up r-cran-fs (1.6.4+dfsg-1) ... Setting up r-cran-rcpp (1.0.13-1) ... Setting up r-cran-curl (5.2.3+dfsg-1) ... Setting up r-cran-codetools (0.2-20-1) ... Setting up r-bioc-biocgenerics (0.50.0-2) ... Setting up r-cran-rlang (1.1.4-1) ... Setting up r-cran-matrixstats (1.4.1-1) ... Setting up r-base-dev (4.4.1-3) ... Setting up littler (0.3.20-1) ... Setting up r-bioc-matrixgenerics (1.16.0-2) ... Setting up r-cran-xfun (0.48+dfsg-1) ... Setting up r-cran-sys (3.4.3-1) ... Setting up r-cran-plogr (0.2.0-3) ... Setting up r-cran-withr (3.0.1+dfsg-1) ... Setting up r-cran-mime (0.12-2) ... Setting up libmoose-perl:amd64 (2.2207-1+b1) ... Setting up r-cran-base64enc (0.1-3-3) ... Setting up r-cran-abind (1.4-8-1) ... Setting up r-cran-digest (0.6.37-1) ... Setting up r-cran-yaml (2.3.10-1) ... Setting up r-cran-lambda.r (1.2.4-2) ... Setting up r-bioc-protgenerics (1.36.0-1) ... Setting up r-cran-evaluate (1.0.0-1) ... Setting up r-cran-dbi (1.2.3-1) ... Setting up r-cran-highr (0.11+dfsg-1) ... Setting up r-cran-snow (1:0.4.4-2) ... Setting up r-cran-glue (1.7.0-1) ... Setting up r-cran-bit (4.0.5-1) ... Setting up r-cran-xtable (1:1.8-4-2) ... Setting up r-cran-cli (3.6.3-1) ... Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... Setting up r-cran-bitops (1.0-8-1) ... Setting up r-bioc-biocversion (3.19.1-1) ... Setting up r-cran-bit64 (4.0.5-1) ... Setting up r-cran-biocmanager (1.30.25+dfsg-1) ... Setting up r-bioc-zlibbioc (1.50.0+dfsg-2) ... Setting up r-cran-askpass (1.2.1-1) ... Setting up r-cran-fastmap (1.2.0-1) ... Setting up r-cran-png (0.1-8-1+b1) ... Setting up r-bioc-biobase (2.64.0-4) ... Setting up r-cran-jsonlite (1.8.9+dfsg-1) ... Setting up r-cran-pkgconfig (2.0.3-2) ... Setting up texlive-latex-base (2024.20240829-2) ... Setting up r-cran-cpp11 (0.5.0-1) ... Setting up r-bioc-s4vectors (0.42.1+dfsg-2) ... Setting up r-cran-futile.logger (1.4.3-4) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up r-cran-later (1.3.2+dfsg-1) ... Setting up r-cran-matrix (1.7-0-3) ... Setting up r-cran-htmltools (0.5.8.1-1) ... Setting up r-cran-tinytex (0.53-1) ... Setting up r-cran-knitr (1.48+dfsg-1) ... Setting up r-cran-cachem (1.1.0-1) ... Setting up r-cran-sass (0.4.9+dfsg-1) ... Setting up r-bioc-iranges (2.38.1-1) ... Setting up r-cran-rcurl (1.98-1.16+dfsg-1) ... Setting up r-cran-restfulr (0.0.15-1) ... Setting up r-cran-vctrs (0.6.5-1) ... Setting up r-cran-openssl (2.2.0+dfsg-1) ... Setting up r-bioc-s4arrays (1.4.1+dfsg-1) ... Setting up r-bioc-biocparallel (1.38.0-2) ... Setting up libwww-curl-simple-perl (0.100191-3) ... Setting up r-bioc-rhtslib (3.0.0+dfsg-1) ... Setting up r-cran-fontawesome (0.5.2-1) ... Setting up r-bioc-biocio (1.14.0+dfsg-1) ... Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... Setting up texlive-bibtex-extra (2024.20240829-1) ... Setting up r-cran-httr (1.4.7+dfsg-1) ... Setting up r-cran-memoise (2.0.1-1) ... Setting up r-cran-promises (1.3.0+dfsg-1) ... Setting up r-cran-blob (1.2.4-1) ... Setting up r-bioc-xvector (0.44.0-1) ... Setting up dh-r (20231212) ... Setting up r-cran-rsqlite (2.3.7-2) ... Setting up r-bioc-ucsc.utils (1.0.0+ds-2) ... Setting up r-bioc-sparsearray (1.4.8+dfsg-1) ... Setting up r-cran-httpuv (1.6.15+dfsg-1) ... Setting up r-bioc-genomeinfodb (1.40.1+dfsg-1) ... Setting up r-cran-bslib (0.7.0+dfsg-1) ... Setting up r-bioc-delayedarray (0.30.1+dfsg-1) ... Setting up r-bioc-genomicranges (1.56.1+dfsg-1) ... Setting up r-bioc-biostrings (2.72.1+dfsg-1) ... Setting up r-bioc-annotationfilter (1.28.0+dfsg-1) ... Setting up r-cran-shiny (1.9.1+dfsg-1) ... Setting up r-cran-rmarkdown (2.28+dfsg-1) ... Setting up r-bioc-rsamtools (2.20.0+dfsg-1) ... Setting up r-cran-bookdown (0.40+dfsg-1) ... Setting up r-bioc-summarizedexperiment (1.34.0+dfsg-1) ... Setting up r-bioc-keggrest (1.44.1+dfsg-1) ... Setting up r-bioc-annotationdbi (1.66.0-1) ... Setting up r-bioc-biocstyle (2.32.1+dfsg-1) ... Setting up r-bioc-genomicalignments (1.40.0-1) ... Setting up r-bioc-rtracklayer (1.64.0-1) ... Setting up r-bioc-genomicfeatures (1.56.0+dfsg-1) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for tex-common (6.18) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. ┌───────────────┐ │ Build │ └───────────────┘ dpkg-buildpackage: info: source package r-bioc-ensembldb dpkg-buildpackage: info: source version 2.28.1+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: host architecture amd64  dpkg-source --before-build .  debian/rules clean dh clean --buildsystem R dh_auto_clean -O--buildsystem=R dh_autoreconf_clean -O--buildsystem=R dh_clean -O--buildsystem=R  debian/rules binary dh binary --buildsystem R dh_update_autotools_config -O--buildsystem=R dh_autoreconf -O--buildsystem=R dh_auto_configure -O--buildsystem=R dh_auto_build -O--buildsystem=R dh_auto_test -O--buildsystem=R create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=R dh_prep -O--buildsystem=R dh_auto_install --destdir=debian/r-bioc-ensembldb/ -O--buildsystem=R I: R Package: ensembldb Version: 2.28.1 I: Building using R version 4.4.1-3 I: R API version: r-api-4.0 I: Using built-time from d/changelog: Thu, 05 Sep 2024 10:16:09 +0200 mkdir -p /srv/build/r-bioc-ensembldb-2.28.1\+dfsg/debian/r-bioc-ensembldb/usr/lib/R/site-library R CMD INSTALL -l /srv/build/r-bioc-ensembldb-2.28.1\+dfsg/debian/r-bioc-ensembldb/usr/lib/R/site-library --clean . "--built-timestamp='Thu, 05 Sep 2024 10:16:09 +0200'" * installing *source* package ‘ensembldb’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading Creating a generic function from function ‘.cds_for_id2’ in package ‘ensembldb’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ensembldb) W: Ignoring specified R dependency: R (>= 3.5.0) I: Using r-bioc-biocgenerics for Depends:BiocGenerics (>= 0.15.10) I: Using r-bioc-genomicranges for Depends:GenomicRanges (>= 1.31.18) I: Using r-bioc-genomicfeatures for Depends:GenomicFeatures (>= 1.49.6) I: Using r-bioc-annotationfilter for Depends:AnnotationFilter (>= 1.5.2) I: Using r-bioc-biocstyle for Suggests:BiocStyle I: Using r-cran-knitr for Suggests:knitr W: Cannot find a debian package for Suggests:EnsDb.Hsapiens.v86 (>= 0.99.8) I: Using r-cran-testthat for Suggests:testthat W: Cannot find a debian package for Suggests:BSgenome.Hsapiens.NCBI.GRCh38 I: Using r-bioc-ggbio for Suggests:ggbio (>= 1.24.0) I: Using r-bioc-gviz for Suggests:Gviz (>= 1.20.0) I: Using r-cran-rmarkdown for Suggests:rmarkdown I: Using r-bioc-annotationhub for Suggests:AnnotationHub I: Using r-cran-rsqlite for Imports:RSQLite (>= 1.1) I: Using r-cran-dbi for Imports:DBI I: Using r-bioc-biobase for Imports:Biobase I: Using r-bioc-genomeinfodb for Imports:GenomeInfoDb I: Using r-bioc-annotationdbi for Imports:AnnotationDbi (>= 1.31.19) I: Using r-bioc-rtracklayer for Imports:rtracklayer I: Using r-bioc-s4vectors for Imports:S4Vectors (>= 0.23.10) I: Using r-bioc-rsamtools for Imports:Rsamtools I: Using r-bioc-iranges for Imports:IRanges (>= 2.13.24) I: Using r-bioc-protgenerics for Imports:ProtGenerics I: Using r-bioc-biostrings for Imports:Biostrings (>= 2.47.9) I: Using r-cran-curl for Imports:curl I: BioConductor API version: r-api-bioc-3.19 I: Use r-bioc-ensembldb as Debian binary package for variables substitution dh_installdocs -O--buildsystem=R dh_installchangelogs -O--buildsystem=R dh_installsystemduser -O--buildsystem=R dh_perl -O--buildsystem=R dh_link -O--buildsystem=R dh_strip_nondeterminism -O--buildsystem=R dh_compress -O--buildsystem=R debian/rules override_dh_fixperms make[1]: Entering directory '/srv/build/r-bioc-ensembldb-2.28.1+dfsg' dh_fixperms find debian -name "*.pl" -exec chmod +x \{\} \; make[1]: Leaving directory '/srv/build/r-bioc-ensembldb-2.28.1+dfsg' dh_missing -O--buildsystem=R dh_installdeb -O--buildsystem=R dh_gencontrol -O--buildsystem=R dpkg-gencontrol: warning: package r-bioc-ensembldb: substitution variable ${perl:Depends} unused, but is defined dh_md5sums -O--buildsystem=R dh_builddeb -O--buildsystem=R dpkg-deb: building package 'r-bioc-ensembldb' in '../r-bioc-ensembldb_2.28.1+dfsg-1_all.deb'.  dpkg-genbuildinfo --build=binary -O../r-bioc-ensembldb_2.28.1+dfsg-1_amd64.buildinfo  dpkg-genchanges -DDistribution=landing --build=binary -mDebian R Packages Maintainers -eDebian R Packages Maintainers -O../r-bioc-ensembldb_2.28.1+dfsg-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included)  dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) This build required 7.2MiB of dedicated disk space. ┌────────────────────────────────────┐ │ Retrieving build artifacts │ └────────────────────────────────────┘ Copied 4 files. Done.